Fitness data for PS417_18980 in Pseudomonas simiae WCS417

3-methyl-2-oxobutanoate hydroxymethyltransferase
SEED: 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)
KEGG: 3-methyl-2-oxobutanoate hydroxymethyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress methylglyoxal 0.032 vol% -0.8 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -1.6 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.7 -3.1 compare
soil soil sample 5; outgrowth in LB -0.7 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -1.8 compare
phage P. simiae OR Antrim MOI 1 -0.6 -1.4 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x +0.5 +0.9 compare
stress 1-ethyl-3-methylimidazolium acetate 35 mM +0.5 +1.2 compare
carbon source RCH2_defined_glucose with MS_media 1x +0.5 +1.2 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.5 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +1.9 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x +0.5 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.9 compare
liquid stress Fraxetin 1 mM; liquid stress +0.6 +1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.1 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x +0.7 +1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +1.3 compare
carbon source L-Valine (C) +1.3 +1.5 compare