Fitness data for PS417_18895 in Pseudomonas simiae WCS417

glucarate dehydratase
SEED: Glucarate dehydratase (EC 4.2.1.40)
KEGG: glucarate dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant control Vogels_fungal_media 0.1X -0.8 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -3.0 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.5 -2.5 compare
root root sample 6; outgrowth in LB -0.5 -1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -1.7 compare
phage Wcs_1 -0.5 -1.2 compare
soil soil sample 7; outgrowth in LB -0.5 -1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -1.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.5 -2.6 compare
liquid stress Scopoletin 3 mM; liquid stress -0.5 -2.0 compare
phage P. simiae Grant Run MOI 10 -0.4 -1.9 compare
solid stress 80% Methanol 3 mM; solid stress -0.4 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.3 compare
soil soil sample 8; outgrowth in LB -0.4 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.0 compare
soil soil sample 2; outgrowth in LB +0.5 +1.9 compare
seeds Growth on radish seeds for 72 hours +0.5 +1.2 compare