Fitness data for PS417_18835 in Pseudomonas simiae WCS417

peptide transporter
SEED: Oligopeptide transporter, OPT family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.6 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.4 -2.0 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.4 -2.4 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.4 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -2.0 compare
carbon source L-Valine (C) -0.3 -1.3 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.3 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.2 compare
phage P. simiae Grant Run MOI 10 +0.3 +1.7 compare
supernatant control Vogels_fungal_media 0.1X +0.4 +1.8 compare
no stress control on plate growth on LB_noSalt plate +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.0 compare
soil soil sample 7; outgrowth in LB +0.4 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +0.9 compare
phage P. simiae ORA MOI 10 +0.5 +1.6 compare
seeds Growth on radish seeds for 72 hours +0.5 +2.1 compare
phage P. simiae OR Antrim MOI 1 +0.6 +2.2 compare