Fitness data for PS417_18395 in Pseudomonas simiae WCS417

D-ribose ABC transporter, permease component RbsC (from data)
Original annotation: ABC transporter permease
SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
KEGG: ribose transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
carbon source Uridine (C) -4.2 -2.9 compare
carbon source Uridine (C) -4.1 -4.9 compare
carbon source D-Ribose (C) -4.0 -4.6 compare
carbon source Cytidine (C) -3.9 -4.3 compare
carbon source Inosine (C) -3.2 -3.5 compare
carbon source D-Ribose (C) -3.2 -4.1 compare
carbon source Inosine (C) -2.8 -3.1 compare
carbon source Cytidine (C) -2.6 -3.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -2.3 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.6 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.5 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -2.5 compare
r2a control R2A control -1.4 -2.7 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.4 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.3 -2.0 compare
phage P. simiae OR1 MOI 0.1 +1.6 +3.3 compare
carbon source 2'-Deoxyinosine 5 mM (C) +1.6 +2.6 compare
phage P. simiae ORA MOI 10 +1.7 +2.5 compare