Fitness data for PS417_18280 in Pseudomonas simiae WCS417

transporter
SEED: RND efflux system, outer membrane lipoprotein CmeC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. simiae OR1 MOI 0.1 -0.7 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -2.6 compare
seeds Growth on radish seeds for 72 hours -0.4 -1.9 compare
motility inner cut, LB soft agar motility assay -0.4 -2.4 compare
phage JP1 MOI 1 -0.4 -1.7 compare
phage P. simiae ORA MOI 0.1 -0.4 -1.5 compare
phage JP1 MOI 10 -0.4 -1.4 compare
liquid stress Fraxetin 2 mM; liquid stress -0.4 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.3 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +0.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.3 +1.5 compare
stress Dimethyl Sulfoxide 4 vol% +0.4 +2.2 compare
carbon source L-Valine (C) +0.4 +1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +2.8 compare
phage P. simiae Grant Run MOI 0.1 +0.4 +1.5 compare
stress Gentamicin 0.008 mg/ml +0.7 +2.9 compare