Fitness data for PS417_18255 in Pseudomonas simiae WCS417

AMP-binding protein
SEED: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases
KEGG: acetyl-CoA synthetase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -1.8 compare
phage P. simiae OR1 MOI 0.1 -0.4 -1.3 compare
carbon source Cytidine (C) -0.4 -2.7 compare
phage P. simiae OR Antrim MOI 1 -0.4 -1.6 compare
solid stress 80% Methanol 2 mM; solid stress +0.4 +1.9 compare
soil soil sample 5; outgrowth in LB +0.4 +1.4 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.4 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.4 compare
carbon source Trisodium citrate (C) +0.4 +2.8 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.5 +1.1 compare
soil soil sample 4; outgrowth in LB +0.5 +2.1 compare
carbon source acetate (C) +0.5 +3.2 compare
seeds Growth on radish seeds for 24 hours +0.5 +1.9 compare
phage Wcs_1 +0.5 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.7 compare
carbon source L-Valine (C) +0.6 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.1 compare