Fitness data for PS417_01810 in Pseudomonas simiae WCS417

ABC transporter permease
SEED: Amino acid ABC transporter, permease protein
KEGG: putative glutamine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. simiae ORA MOI 0.1 -0.9 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.9 compare
phage P. simiae Grant Run MOI 10 -0.5 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.5 +2.7 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.5 +2.3 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.5 +2.4 compare
phage P. simiae ORA MOI 10 +0.5 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.7 compare
carbon source Carbon source D-Mannitol 5 mM +0.6 +2.8 compare
seeds Growth on radish seeds for 24 hours +0.6 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.3 compare
seeds Growth on radish seeds for 72 hours +0.6 +2.1 compare
carbon source L-Valine (C) +0.6 +2.0 compare
phage P. simiae OR Antrim MOI 0.1 +0.6 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +3.5 compare
root root sample 6; outgrowth in LB +0.9 +2.2 compare