Fitness data for PS417_18080 in Pseudomonas simiae WCS417

general secretion pathway protein GspF
SEED: General secretion pathway protein F
KEGG: general secretion pathway protein F

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
rhizosphere rhizosphere sample 2; outgrowth in LB -0.8 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.6 compare
phage Wcs_0.1 -0.6 -2.1 compare
phage JP1 MOI 1 -0.6 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.9 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.6 +2.0 compare
motility outer cut, LB soft agar motility assay +0.6 +1.8 compare
phage P. simiae OR Antrim MOI 1 +0.7 +1.2 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.7 +2.1 compare
ecofab LB in EcoFAB_3.5mL +0.7 +3.1 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.7 +2.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.7 compare
phage P. simiae Grant Run MOI 0.1 +1.0 +3.6 compare
phage JP1 MOI 0.1 +1.4 +3.4 compare