Fitness data for PS417_17980 in Pseudomonas simiae WCS417

ABC transporter permease
SEED: YbbM seven transmembrane helix protein
KEGG: putative ABC transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.5 -2.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.5 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.3 -2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.2 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -1.2 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -1.7 compare
carbon source Cytidine (C) -1.1 -2.5 compare
carbon source Carbon source D-Mannitol 10 mM -1.1 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -1.7 compare
motility outer cut, LB soft agar motility assay -1.1 -1.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.1 -1.9 compare
carbon source L-Asparagine (C) -1.1 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.1 +2.6 compare
phage P. simiae Grant Run MOI 0.1 +1.2 +2.8 compare
phage P. simiae Grant Run MOI 0.1 +1.3 +2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.4 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.6 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.7 +1.6 compare