Fitness data for PS417_17965 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -0.9 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.1 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.5 +1.9 compare
liquid stress Fraxetin 3 mM; liquid stress +0.5 +1.9 compare
carbon source Fumarate (C) +0.5 +2.8 compare
stress Doxycycline hyclate 0.001 mg/ml +0.5 +1.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +1.3 compare
phage JP1 MOI 10 +0.5 +1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +1.7 compare
phage P. simiae ORA MOI 0.1 +0.5 +1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +2.3 compare
carbon source Carbon source D-Mannitol 2.5 mM +0.7 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.2 compare
seeds Growth on radish seeds for 72 hours +0.7 +2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.4 +1.4 compare