Fitness data for PS417_17960 in Pseudomonas simiae WCS417

LysR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
soil soil sample 2; outgrowth in LB -1.1 -2.2 compare
stress R2A with Fusaric 120 ug/mL -1.0 -2.6 compare
solid stress Fraxetin 2 mM; solid stress -0.8 -2.3 compare
phage P. simiae ORA MOI 1 -0.8 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.2 compare
phage P. simiae OR Antrim MOI 10 -0.8 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -1.7 compare
phage P. simiae Grant Run MOI 10 -0.8 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.0 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.7 -1.6 compare
carbon source Carbon source L-Ornithine 5 mM -0.7 -1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -1.0 compare
stress R2A with Fusaric 120 ug/mL -0.6 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -1.9 compare
soil soil sample 5; outgrowth in LB -0.6 -0.8 compare
supernatant control Vogels_fungal_media 0.1X +0.6 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB +0.6 +2.1 compare
supernatant control Vogels_fungal_media 0.1X +0.7 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.8 +2.1 compare