Fitness data for PS417_17955 in Pseudomonas simiae WCS417

pyridoxamine 5'-phosphate oxidase
SEED: probable iron-sulfur binding protein YPO1417

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source 2'-Deoxyinosine 5 mM (C) -0.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.4 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -2.2 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.7 compare
stress methylglyoxal 0.032 vol% -0.4 -1.1 compare
carbon source RCH2_defined_glucose with MS_media 1x -0.4 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -1.3 compare
phage P. simiae OR Antrim MOI 1 -0.4 -1.5 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x -0.4 -2.4 compare
seeds Growth on radish seeds for 24 hours -0.4 -1.5 compare
liquid stress Scopoletin 1 mM; liquid stress -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.3 compare
motility inner cut, LB soft agar motility assay +0.4 +2.2 compare
phage P. simiae ORA MOI 10 +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.2 compare
soil soil sample 4; outgrowth in LB +0.6 +1.8 compare