Fitness data for PS417_17825 in Pseudomonas simiae WCS417

AraC family transcriptional regulator
SEED: Transcriptional activator of 4-hydroxyphenylacetate 3-monooxygenase operon, XylS/AraC family
KEGG: AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. simiae OR Antrim MOI 10 -0.8 -3.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.5 compare
phage P. simiae Grant Run MOI 10 -0.6 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.5 compare
root root sample 6; outgrowth in LB -0.5 -1.4 compare
phage P. simiae ORA MOI 0.1 -0.5 -1.5 compare
solid stress Fraxetin 0.5 mM; solid stress -0.5 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -1.7 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -1.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.4 +1.6 compare
seeds Growth on radish seeds for 72 hours +0.5 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.1 compare
nophagecontrol Only library +0.6 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +1.8 compare
seeds Growth on radish seeds for 72 hours +0.6 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0 +1.0 compare