Fitness data for PS417_17735 in Pseudomonas simiae WCS417

LacI family transcriptional regulator
SEED: Xylose ABC transporter, periplasmic xylose-binding protein XylF
KEGG: ribose transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source Xylitol (C) -3.8 -4.9 compare
carbon source Xylitol (C) -3.0 -6.4 compare
phage Wcs_1 -1.6 -2.1 compare
soil soil sample 5; outgrowth in LB -1.5 -1.5 compare
root root sample 6; outgrowth in LB -1.0 -1.4 compare
soil soil sample 7; outgrowth in LB -1.0 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.2 compare
seeds Growth on radish seeds for 72 hours -0.9 -1.2 compare
carbon source Carbon source D-Mannitol 2.5 mM -0.8 -2.0 compare
carbon source Carbon source L-Ornithine 5 mM -0.8 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -1.9 compare
soil soil sample 4; outgrowth in LB +0.8 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +0.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.9 +1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.9 +1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.9 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.9 +2.2 compare
phage P. simiae ORA MOI 1 +1.0 +1.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.1 +2.0 compare