Fitness data for PS417_17705 in Pseudomonas simiae WCS417

LacI family transcriptional regulator
SEED: FIG000557: hypothetical protein co-occurring with RecR
KEGG: LacI family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
seeds Growth on radish seeds for 72 hours -2.6 -2.3 compare
phage P. simiae ORA MOI 0.1 -2.2 -2.1 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.9 -1.8 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.9 -2.0 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.9 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.5 -3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.4 -2.5 compare
carbon source 2-Deoxy-D-Ribose (C) -1.4 -2.7 compare
carbon source 2-Deoxy-D-Ribose (C) -1.3 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.3 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -2.1 compare
carbon source Gly-Glu (C) -1.3 -2.4 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.3 +2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.3 +1.4 compare
carbon source Xylitol (C) +1.4 +3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.5 +2.8 compare
carbon source Xylitol (C) +1.8 +5.6 compare