Fitness data for PS417_17635 in Pseudomonas simiae WCS417

hemolysin secretion protein D
SEED: pyoverdine-specific efflux macA-like protein
KEGG: macrolide-specific efflux protein MacA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -3.0 -8.5 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -1.8 -6.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -3.2 compare
no stress control on plate growth on LB_noSalt plate -0.9 -4.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.8 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.8 -1.9 compare
stress nitrate 200 mM -0.7 -4.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.7 -2.5 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.7 -1.7 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.6 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.7 compare
stress Phosphomycin 0.001 mg/ml +0.6 +2.5 compare
solid stress Fraxetin 3 mM; solid stress +0.7 +2.3 compare
solid stress Fraxetin 3 mM; solid stress +0.7 +2.9 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2 +0.7 +3.4 compare
phage JP1 MOI 10 +0.7 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +3.3 compare
stress methylglyoxal 0.032 vol% +1.0 +1.5 compare
stress Gentamicin 0.008 mg/ml +1.1 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.3 +1.6 compare