Fitness data for PS417_17405 in Pseudomonas simiae WCS417

AraC family transcriptional regulator
SEED: Oxidoreductase, short chain dehydrogenase/reductase family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
root root sample 6; outgrowth in LB -4.5 -2.6 compare
phage Wcs_1 -2.6 -2.5 compare
seeds Growth on radish seeds for 72 hours -2.1 -1.6 compare
carbon source 2'-Deoxyinosine 5 mM (C) -2.0 -1.8 compare
seeds Growth on radish seeds for 72 hours -2.0 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.7 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.7 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.4 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.4 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -1.2 compare
soil soil sample 2; outgrowth in LB -1.2 -1.5 compare
carbon source L-Valine (C) -1.1 -0.9 compare
soil soil sample 5; outgrowth in LB +1.1 +1.6 compare
phage P. simiae Grant Run MOI 0.1 +1.1 +1.7 compare
solid stress 80% Methanol 2 mM; solid stress +1.3 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.4 +1.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.6 +1.2 compare
phage P. simiae OR Antrim MOI 0.1 +1.7 +2.1 compare