Fitness data for PS417_17375 in Pseudomonas simiae WCS417

C4-dicarboxylate ABC transporter
SEED: TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.1 -1.9 compare
phage P. simiae OR Antrim MOI 1 -1.1 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -1.5 compare
carbon source succinate (C) -0.9 -3.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -1.9 compare
carbon source L-Valine (C) -0.8 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.8 compare
phage JP1 MOI 10 +0.8 +2.2 compare
solid stress 80% Methanol 3 mM; solid stress +0.8 +1.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.5 compare
stress Gentamicin 0.008 mg/ml +0.9 +2.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.0 +2.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.3 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.3 +3.9 compare