Fitness data for PS417_17335 in Pseudomonas simiae WCS417

TetR family transcriptional regulator
SEED: Transcriptional regulator RutR of pyrimidine catabolism (TetR family)
KEGG: TetR/AcrR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.9 compare
phage P. simiae OR Antrim MOI 1 -0.6 -2.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.4 compare
carbon source Gly-Glu (C) -0.5 -3.3 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.1 compare
seeds Growth on radish seeds for 72 hours -0.5 -1.6 compare
carbon source Fumarate (C) -0.4 -2.1 compare
stress Gentamicin 0.008 mg/ml -0.4 -1.6 compare
carbon source D,L-Lactate (C) -0.4 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.4 compare
nophagecontrol Only library -0.4 -1.4 compare
phage JP1 MOI 1 -0.4 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.6 compare
nitrogen source Uridine (N) +0.4 +2.6 compare
soil soil sample 8; outgrowth in LB +0.4 +1.7 compare
carbon source L-Valine (C) +0.5 +1.7 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.5 +1.8 compare
root root sample 6; outgrowth in LB +0.5 +1.9 compare
soil soil sample 3; outgrowth in LB +0.7 +2.9 compare