Fitness data for PS417_17325 in Pseudomonas simiae WCS417

dihydropyrimidine dehydrogenase
SEED: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
KEGG: glutamate synthase (NADPH/NADH) small chain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
nitrogen source Uridine (N) -6.5 -6.3 compare
nitrogen source Cytidine (N) -2.7 -5.2 compare
nitrogen source Cytosine (N) -2.7 -9.1 compare
phage P. simiae OR Antrim MOI 0.1 -1.0 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.0 -3.8 compare
soil soil sample 7; outgrowth in LB -0.7 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.1 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.6 +1.4 compare
soil soil sample 2; outgrowth in LB +0.6 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +0.6 compare
phage JP1 MOI 1 +0.7 +2.0 compare
nophagecontrol Only library +0.7 +2.3 compare
phage JP1 MOI 0.1 +0.7 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.8 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.9 +2.4 compare