Fitness data for PS417_17240 in Pseudomonas simiae WCS417

trigger factor
SEED: Cell division trigger factor (EC 5.2.1.8)
KEGG: trigger factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.9)


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group condition fitness t score  
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -4.4 -4.4 compare
phage P. simiae OR Antrim MOI 10 -3.2 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.1 -2.8 compare
soil soil sample 6; outgrowth in LB -3.0 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.6 -3.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.5 -2.3 compare
agar plate interaction control Taped volatile agar plate with no fungus -2.5 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.5 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.4 -2.1 compare
phage P. simiae OR Antrim MOI 1 -2.4 -2.1 compare
phage P. simiae OR Antrim MOI 0.1 -2.4 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -2.3 -3.6 compare
supernatant control Vogels_fungal_media; pH 5.5 -2.3 -5.0 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -2.2 -3.0 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -2.1 -3.9 compare
phage P. simiae OR Antrim MOI 1 -2.1 -2.0 compare
motility outer cut, LB soft agar motility assay -2.0 -4.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB -2.0 -4.9 compare
motility inner cut, LB soft agar motility assay -1.9 -3.8 compare
phage P. simiae ORA MOI 1 -1.9 -2.0 compare