Fitness data for PS417_17160 in Pseudomonas simiae WCS417

1-aminocyclopropane-1-carboxylate deaminase
SEED: 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)
KEGG: 1-aminocyclopropane-1-carboxylate deaminase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
soil soil sample 8; outgrowth in LB -1.9 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.9 -2.7 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.4 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.3 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -1.3 -1.3 compare
soil soil sample 3; outgrowth in LB -1.3 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.3 -2.3 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.2 -1.5 compare
stress methylglyoxal 0.032 vol% -1.1 -1.5 compare
no stress control on plate growth on LB_noSalt plate -1.1 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.0 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.0 -1.8 compare
carbon source L-Valine (C) +1.0 +1.7 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +1.1 +1.9 compare
carbon source 2'-Deoxyinosine 5 mM (C) +1.1 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.2 +1.3 compare
soil soil sample 6; outgrowth in LB +1.2 +1.3 compare