Fitness data for PS417_17135 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: transcriptional regulator, MerR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.2 -3.4 compare
phage JP1 MOI 1 -1.1 -3.1 compare
phage P. simiae OR1 MOI 0.1 -0.9 -2.8 compare
stress methylglyoxal 0.032 vol% -0.8 -1.8 compare
seeds Growth on radish seeds for 24 hours -0.8 -2.6 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.7 -2.0 compare
carbon source octanoate (C) -0.7 -2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.9 compare
motility inner cut, LB soft agar motility assay -0.6 -2.4 compare
phage JP1 MOI 10 -0.6 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -2.0 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.5 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.2 compare
soil soil sample 3; outgrowth in LB +0.7 +1.2 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.7 +1.6 compare
soil soil sample 6; outgrowth in LB +0.7 +1.7 compare
root root sample 6; outgrowth in LB +1.0 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.6 +1.8 compare