Fitness data for PS417_17110 in Pseudomonas simiae WCS417

spore coat protein
SEED: Sigma-fimbriae uncharacterized subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -3.7 compare
phage P. simiae OR1 MOI 0.1 -1.3 -2.7 compare
phage P. simiae ORA MOI 0.1 -1.1 -3.3 compare
no phage control Time6-nophage -0.9 -2.8 compare
solid stress Fraxetin 2 mM; solid stress -0.9 -3.0 compare
carbon source Carbon source L-Citrulline 5 mM -0.9 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.2 compare
phage P. simiae OR Antrim MOI 1 -0.8 -2.1 compare
stress Phosphomycin 0.001 mg/ml -0.8 -3.1 compare
motility inner cut, LB soft agar motility assay -0.8 -2.2 compare
stress Paraquat dichloride 0.002 mg/ml -0.8 -3.3 compare
motility outer cut, LB soft agar motility assay -0.8 -2.9 compare
supernatant control Vogels_fungal_media 0.1X -0.7 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.0 compare
seeds Growth on radish seeds for 72 hours +0.9 +2.8 compare
ecofab LB in EcoFAB_3.5mL +0.9 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.2 +1.1 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +1.3 +2.5 compare