Fitness data for PS417_17015 in Pseudomonas simiae WCS417

Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data)
Original annotation: isovaleryl-CoA dehydrogenase
SEED: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4)
KEGG: isovaleryl-CoA dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source L-Leucine (C) -3.9 -8.9 compare
carbon source L-Leucine (C) -3.1 -5.6 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -2.4 -5.5 compare
soil soil sample 3; outgrowth in LB -1.7 -3.3 compare
carbon source Gly-Glu (C) -1.6 -3.8 compare
soil soil sample 2; outgrowth in LB -1.5 -2.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.2 -2.7 compare
carbon source Gly-Glu (C) -1.2 -4.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -2.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.9 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -2.6 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.8 +2.2 compare
soil soil sample 6; outgrowth in LB +0.9 +0.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.0 +1.5 compare
root root sample 6; outgrowth in LB +1.1 +0.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +1.6 +1.0 compare