Fitness data for PS417_16960 in Pseudomonas simiae WCS417

fimbrial protein
SEED: Outer membrane usher protein FIMD
KEGG: outer membrane usher protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -1.9 compare
supernatant control Vogels_fungal_media 0.1X -0.3 -1.9 compare
phage P. simiae OR Antrim MOI 10 -0.3 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.7 compare
soil soil sample 7; outgrowth in LB +0.3 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.3 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.6 compare
seeds Growth on radish seeds for 72 hours +0.4 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.6 compare
soil soil sample 6; outgrowth in LB +0.4 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +2.5 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.4 +1.5 compare
seeds Growth on radish seeds for 72 hours +0.5 +2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.7 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.5 +2.8 compare
root root sample 6; outgrowth in LB +0.6 +1.6 compare