Fitness data for PS417_16945 in Pseudomonas simiae WCS417

LuxR family transcriptional regulator
SEED: two component transcriptional regulator, LuxR family
KEGG: two-component system, NarL family, captular synthesis response regulator RcsB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.6 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -0.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.9 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -0.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.8 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.8 compare
stress Choline chloride 300 mM +0.8 +1.1 compare
phage P. simiae Grant Run MOI 0.1 +0.8 +2.4 compare
carbon source octanoate (C) +0.8 +2.2 compare
stress LB_noSalt with Chloride 500 mM +0.9 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.9 +2.5 compare
stress Dimethyl Sulfoxide 5 vol% +0.9 +1.4 compare
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.9 +2.1 compare
carbon source Gly-Glu (C) +0.9 +1.7 compare
phage P. simiae OR Antrim MOI 1 +1.0 +3.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +2.1 compare