Fitness data for PS417_16565 in Pseudomonas simiae WCS417

secretin
SEED: Type II and III secretion system family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4 -2.4 compare
solid stress Fraxetin 3 mM; solid stress -1.1 -2.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -3.5 compare
solid stress Fraxetin 2 mM; solid stress -0.9 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -2.0 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.7 -1.9 compare
phage JP1 MOI 1 -0.7 -1.7 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.7 -1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -2.0 compare
carbon source Fumarate (C) +0.7 +1.8 compare
carbon source Trisodium citrate (C) +0.7 +2.3 compare
carbon source L-Lactate (C) +0.7 +3.2 compare
carbon source 2-Deoxy-D-Ribose (C) +0.8 +3.5 compare
soil soil sample 2; outgrowth in LB +1.0 +3.2 compare
carbon source L-Valine (C) +1.1 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.4 +1.4 compare
stress Gentamicin 0.008 mg/ml +1.7 +3.7 compare