Fitness data for PS417_01620 in Pseudomonas simiae WCS417

preprotein translocase subunit SecB
SEED: Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state)
KEGG: preprotein translocase subunit SecB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.6)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -4.5 -3.9 compare
soil soil sample 5; outgrowth in LB -3.5 -2.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -3.4 -1.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -3.0 -2.2 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -3.0 -4.0 compare
root root sample 6; outgrowth in LB -2.6 -2.5 compare
soil soil sample 3; outgrowth in LB -2.2 -2.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -2.2 -3.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.0 -3.1 compare
stress NaCl stress 250 mM -2.0 -3.5 compare
liquid stress Fraxetin 3 mM; liquid stress -1.9 -3.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.9 -2.3 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -1.8 -2.2 compare
motility outer cut, LB soft agar motility assay -1.8 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.7 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -2.2 compare
solid stress Fraxetin 0.5 mM; solid stress -1.6 -3.0 compare
carbon source D-Glucose-6-Phosphate (C) +2.8 +9.6 compare
carbon source D-Glucose-6-Phosphate (C) +4.5 +14.4 compare