Fitness data for PS417_16125 in Pseudomonas simiae WCS417

AraC family transcriptional regulator
SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.6 -3.2 compare
soil soil sample 3; outgrowth in LB -0.6 -1.4 compare
stress Choline chloride 300 mM -0.6 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.7 compare
liquid stress Scopoletin 3 mM; liquid stress -0.6 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -2.5 compare
liquid stress Fraxetin 1 mM; liquid stress -0.5 -2.7 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.5 -1.5 compare
stress Cisplatin 0.01 mg/ml +0.5 +2.2 compare
phage P. simiae Grant Run MOI 0.1 +0.5 +1.5 compare
phage P. simiae OR Antrim MOI 1 +0.5 +1.6 compare
phage P. simiae OR Antrim MOI 10 +0.6 +1.3 compare
carbon source L-Alanine (C) +0.6 +2.8 compare
phage P. simiae Grant Run MOI 10 +0.8 +1.8 compare
carbon source Trisodium citrate (C) +0.8 +1.7 compare