Fitness data for PS417_16120 in Pseudomonas simiae WCS417

transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.9 -2.8 compare
soil soil sample 5; outgrowth in LB -0.9 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.7 compare
solid stress Fraxetin 0.5 mM; solid stress -0.6 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.7 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -1.0 compare
solid stress 80% Methanol 3 mM; solid stress +0.5 +1.3 compare
stress 2-Furfuraldehyde 0.03 vol% +0.5 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.3 compare
stress Doxycycline hyclate 0.001 mg/ml +0.5 +1.5 compare
phage P. simiae Grant Run MOI 10 +0.5 +1.5 compare
carbon source octanoate (C) +0.6 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.3 compare
stress Choline chloride 300 mM +0.6 +2.5 compare
solid stress Fraxetin 3 mM; solid stress +0.6 +2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.6 +0.9 compare
stress 1-ethyl-3-methylimidazolium acetate 35 mM +0.7 +2.2 compare
soil soil sample 6; outgrowth in LB +0.8 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.0 compare