Fitness data for PS417_16080 in Pseudomonas simiae WCS417

AraC family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage P. simiae OR Antrim MOI 0.1 -1.6 -1.6 compare
seeds Growth on radish seeds for 72 hours -1.3 -1.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.3 -2.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.2 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.3 compare
phage JP1 MOI 1 -1.1 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -1.5 compare
phage JP1 MOI 10 -0.9 -1.2 compare
soil soil sample 2; outgrowth in LB -0.9 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.9 -1.8 compare
carbon source D-Galactose (C) -0.8 -1.9 compare
carbon source L-Valine (C) +0.8 +1.0 compare
seeds Growth on radish seeds for 72 hours +0.9 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.8 compare
carbon source Carbon source D-Mannitol 10 mM +1.0 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.2 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.3 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.0 +2.6 compare