Fitness data for PS417_01590 in Pseudomonas simiae WCS417

polysaccharide deacetylase
SEED: Possible divergent polysaccharide deacetylase
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.9 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.4 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.9 -1.6 compare
motility inner cut, LB soft agar motility assay -1.8 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.5 -2.1 compare
seeds Growth on radish seeds for 24 hours -1.3 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.3 -1.6 compare
carbon source Inosine (C) -1.1 -2.3 compare
phage JP1 MOI 1 -1.1 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -1.1 compare
solid stress Fraxetin 3 mM; solid stress -1.0 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.9 -1.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +1.7 compare
phage P. simiae ORA MOI 1 +1.0 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.2 +2.3 compare
carbon source L-Valine (C) +1.2 +2.3 compare
phage JP1 MOI 1 +1.2 +1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.3 +1.6 compare
seeds Growth on radish seeds for 72 hours +1.5 +1.6 compare
stress Gentamicin 0.008 mg/ml +1.7 +3.2 compare