Fitness data for PS417_15940 in Pseudomonas simiae WCS417

mechanosensitive ion channel protein MscS
SEED: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source 2'-Deoxyinosine 5 mM (C) -0.9 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -2.8 compare
phage JP1 MOI 0.1 -0.7 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.6 compare
root root sample 6; outgrowth in LB -0.6 -1.6 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.6 -2.1 compare
soil soil sample 3; outgrowth in LB -0.5 -1.6 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.5 -1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -2.2 compare
phage JP1 MOI 1 -0.5 -1.1 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.5 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.6 compare
carbon source L-Valine (C) +0.5 +1.1 compare
carbon source Carbon source L-Ornithine 5 mM +0.5 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.6 compare