Fitness data for PS417_15935 in Pseudomonas simiae WCS417

Rrf2 family transcriptional regulator
SEED: Rrf2 family transcriptional regulator, group III

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
carbon source L-Valine (C) -3.9 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.5 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.8 -2.3 compare
carbon source L-Valine (C) -2.8 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.5 -2.6 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -2.5 -1.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.7 -2.5 compare
phage P. simiae OR Antrim MOI 10 -1.6 -1.5 compare
carbon source L-Isoleucine (C) -1.5 -2.9 compare
carbon source L-Leucine (C) -1.4 -1.9 compare
agar plate interaction control Taped volatile agar plate with no fungus -1.2 -1.0 compare
carbon source L-Alanine (C) -1.2 -2.1 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.1 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.1 -1.9 compare
nophagecontrol Only library +1.1 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.4 +1.7 compare
nophagecontrol TIme6-nophage +1.4 +3.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.7 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.9 +1.2 compare