Fitness data for PS417_01585 in Pseudomonas simiae WCS417

amino acid ABC transporter substrate-binding protein
SEED: ABC-type amino acid transport, signal transduction systems, periplasmic component/domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.9 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.9 -3.0 compare
nophagecontrol Only library -0.9 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.5 compare
soil soil sample 5; outgrowth in LB +0.8 +0.8 compare
solid stress Fraxetin 3 mM; solid stress +0.9 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.9 +2.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.9 +2.3 compare
soil soil sample 2; outgrowth in LB +1.0 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +2.1 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +1.1 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.1 +2.6 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +1.2 +1.4 compare
soil soil sample 6; outgrowth in LB +1.2 +1.8 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +1.2 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.2 +4.1 compare
soil soil sample 3; outgrowth in LB +1.4 +2.1 compare
root root sample 6; outgrowth in LB +1.6 +1.5 compare
stress methylglyoxal 0.032 vol% +1.7 +4.4 compare