Fitness data for PS417_15905 in Pseudomonas simiae WCS417

AraC family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
root root sample 6; outgrowth in LB -0.6 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.3 compare
stress 6-methoxy-2(3H)-benzoxazolone 2.5 mM -0.5 -2.5 compare
phage P. simiae OR Antrim MOI 0.1 -0.5 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.2 compare
phage P. simiae OR Antrim MOI 1 -0.5 -2.3 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.4 -2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.2 compare
seeds Growth on radish seeds for 72 hours +0.4 +1.7 compare
carbon source L-Leucine (C) +0.4 +2.3 compare
carbon source D-Glucose (C) +0.4 +2.2 compare
supernatant control Vogels_fungal_media 0.1X +0.5 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.8 compare
carbon source Trisodium citrate (C) +0.5 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +1.9 compare
carbon source L-Valine (C) +0.7 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +1.5 compare