Fitness data for PS417_15870 in Pseudomonas simiae WCS417

histidine kinase
SEED: Sensor histidine kinase/response regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil soil sample 5; outgrowth in LB -0.7 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.6 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.7 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.1 compare
carbon source D-Lactate (C) -0.5 -2.3 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.4 compare
motility inner cut, LB soft agar motility assay +0.5 +1.4 compare
phage Wcs_1 +0.5 +1.9 compare
phage P. simiae OR Antrim MOI 1 +0.5 +1.2 compare
soil soil sample 4; outgrowth in LB +0.6 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.5 compare
nophagecontrol Only library +0.7 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.9 compare
phage JP1 MOI 1 +0.7 +2.4 compare
seeds Growth on radish seeds for 72 hours +0.7 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.1 +1.7 compare