Fitness data for PS417_15825 in Pseudomonas simiae WCS417

Crp/Fnr family transcriptional regulator
SEED: transcriptional regulator, Crp/Fnr family
KEGG: CRP/FNR family transcriptional regulator, anaerobic regulatory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.7 -2.7 compare
carbon source L-Valine (C) -0.5 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.7 compare
phage P. simiae Grant Run MOI 0.1 -0.5 -2.3 compare
soil soil sample 3; outgrowth in LB -0.5 -2.0 compare
stress methylglyoxal 0.032 vol% -0.4 -1.3 compare
carbon source Carbon source L-Ornithine 10 mM -0.4 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.6 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.4 -2.1 compare
stress Phosphomycin 0.001 mg/ml -0.4 -1.6 compare
liquid stress Scopoletin 3 mM; liquid stress -0.4 -2.4 compare
phage JP1 MOI 1 +0.4 +1.8 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +2.4 compare
soil soil sample 5; outgrowth in LB +0.4 +1.4 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.5 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.7 compare
carbon source L-Valine (C) +0.5 +1.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.7 +1.3 compare