Fitness data for PS417_15630 in Pseudomonas simiae WCS417

DeoR faimly transcriptional regulator
SEED: Galactitol utilization operon repressor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source 2'-Deoxyinosine 5 mM (C) -0.6 -2.4 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.6 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.4 compare
stress methylglyoxal 0.032 vol% -0.5 -0.9 compare
phage P. simiae OR Antrim MOI 10 -0.5 -2.4 compare
stress Nalidixic 0.015 mg/ml -0.5 -1.8 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.5 -2.1 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x -0.5 -2.2 compare
phage JP1 MOI 10 -0.5 -1.2 compare
seeds Growth on radish seeds for 24 hours -0.5 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.9 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.5 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.9 compare
phage P. simiae OR Antrim MOI 1 +0.5 +1.6 compare
soil soil sample 3; outgrowth in LB +0.5 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.5 compare
soil soil sample 8; outgrowth in LB +0.7 +2.1 compare
seeds Growth on radish seeds for 72 hours +0.9 +2.3 compare