Fitness data for PS417_15620 in Pseudomonas simiae WCS417

alpha/beta hydrolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -1.2 -3.0 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.0 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.3 compare
no phage control Time6-nophage -0.5 -1.8 compare
stress Thallium(I) acetate 0.0625 mg/ml -0.5 -1.9 compare
carbon source Ethanol (C) -0.5 -2.6 compare
carbon source L-Histidine (C) -0.4 -2.0 compare
carbon source m-Inositol (C) -0.4 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Methionine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -1.9 compare
phage P. simiae OR Antrim MOI 1 +0.4 +1.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.4 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.4 compare
stress Gentamicin 0.008 mg/ml +0.5 +1.7 compare
phage P. simiae Grant Run MOI 10 +0.5 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +0.9 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.5 +2.0 compare
soil soil sample 6; outgrowth in LB +0.5 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.2 compare