Fitness data for PS417_15585 in Pseudomonas simiae WCS417

DNA repair nucleotidyltransferase
SEED: DNA polymerase-like protein PA0670
KEGG: protein ImuB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.2 -2.9 compare
motility inner cut, LB soft agar motility assay -1.1 -2.3 compare
soil soil sample 3; outgrowth in LB -1.1 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -1.1 -2.3 compare
liquid stress 80% Methanol 2 mM; liquid stress -1.0 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.2 compare
carbon source D-Gluconic Acid (C) -0.8 -2.6 compare
phage P. simiae Grant Run MOI 0.1 -0.8 -1.9 compare
phage P. simiae OR Antrim MOI 0.1 -0.7 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -1.0 compare
phage P. simiae Grant Run MOI 10 -0.7 -1.6 compare
solid stress 80% Methanol 2 mM; solid stress +0.7 +1.3 compare
seeds Growth on radish seeds for 72 hours +0.8 +1.3 compare
soil soil sample 7; outgrowth in LB +0.8 +1.9 compare
carbon source L-Valine (C) +0.9 +2.1 compare
phage JP1 MOI 0.1 +0.9 +2.4 compare
phage P. simiae OR1 MOI 0.1 +1.0 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.4 compare
phage JP1 MOI 1 +1.1 +2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.3 +1.0 compare