Fitness data for PS417_15565 in Pseudomonas simiae WCS417

transketolase
SEED: Transketolase (EC 2.2.1.1)
KEGG: transketolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.7 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.3 -1.8 compare
phage JP1 MOI 10 -0.3 -1.5 compare
solid stress Fraxetin 3 mM; solid stress -0.3 -1.5 compare
soil soil sample 3; outgrowth in LB +0.3 +1.1 compare
soil soil sample 6; outgrowth in LB +0.3 +1.2 compare
soil soil sample 4; outgrowth in LB +0.3 +1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +1.9 compare
solid stress Fraxetin 2 mM; solid stress +0.3 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.3 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +1.7 compare
soil soil sample 5; outgrowth in LB +0.3 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +1.6 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.4 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.5 compare
soil soil sample 2; outgrowth in LB +0.5 +2.2 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.6 +1.8 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.6 +1.5 compare
root root sample 6; outgrowth in LB +0.8 +2.5 compare