Fitness data for PS417_15540 in Pseudomonas simiae WCS417

NUDIX hydrolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
rhizosphere rhizosphere sample 2; outgrowth in LB -2.7 -1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.0 -0.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.9 -1.3 compare
soil soil sample 4; outgrowth in LB -1.8 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -0.8 compare
nophagecontrol TIme6-nophage -1.6 -1.7 compare
soil soil sample 7; outgrowth in LB -1.6 -0.9 compare
stress Aluminum chloride 4 mM -1.6 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -0.9 compare
motility outer cut, LB soft agar motility assay -1.5 -1.6 compare
phage P. simiae OR1 MOI 0.1 -1.5 -0.7 compare
solid stress Fraxetin 2 mM; solid stress -1.4 -2.0 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +1.5 +2.2 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +1.5 +2.4 compare
carbon source 2'-Deoxyinosine 5 mM (C) +1.5 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.7 +1.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +2.0 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +2.1 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +2.1 +4.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +2.1 +1.4 compare