Fitness data for PS417_15535 in Pseudomonas simiae WCS417

oxidoreductase
SEED: Oxidoreductase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -1.1 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -2.8 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.0 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -2.8 compare
motility outer cut, LB soft agar motility assay -0.9 -2.4 compare
motility outer cut, LB soft agar motility assay -0.9 -2.0 compare
soil soil sample 4; outgrowth in LB -0.9 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.8 -2.3 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.8 +1.4 compare
seeds Growth on radish seeds for 72 hours +0.8 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.8 +3.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.8 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.3 +2.5 compare
stress methylglyoxal 0.032 vol% +1.3 +2.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.4 +1.5 compare
carbon source L-Valine (C) +1.4 +2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +2.7 +1.5 compare