Fitness data for PS417_15355 in Pseudomonas simiae WCS417

sigma factor sigB regulation protein rsbQ
SEED: Hydrolase of unknown specificity RsbQ, part of a novel [RsbQ - PAS domain] bacterial sensing module

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -0.7 -1.9 compare
carbon source L-Histidine (C) -0.6 -3.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.5 compare
phage P. simiae Grant Run MOI 10 -0.6 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.9 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.6 -1.4 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.6 -1.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.6 compare
carbon source L-Valine (C) +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.3 compare
soil soil sample 4; outgrowth in LB +0.6 +1.7 compare
seeds Growth on radish seeds for 72 hours +0.6 +1.6 compare
phage Wcs_0.1 +0.6 +2.1 compare
carbon source octanoate (C) +0.6 +3.3 compare
root root sample 6; outgrowth in LB +0.6 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +3.3 compare
phage P. simiae OR Antrim MOI 1 +0.8 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +2.3 compare