Fitness data for PS417_15335 in Pseudomonas simiae WCS417

hypothetical protein
SEED: Secreted protein Hcp
KEGG: type VI secretion system secreted protein Hcp

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.2 compare
seeds Growth on radish seeds for 24 hours -1.0 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.3 compare
phage P. simiae ORA MOI 0.1 -0.9 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +1.4 compare
soil soil sample 3; outgrowth in LB +1.0 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +1.2 compare
soil soil sample 6; outgrowth in LB +1.1 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.2 +1.3 compare
soil soil sample 8; outgrowth in LB +1.2 +1.1 compare
soil soil sample 7; outgrowth in LB +1.3 +1.0 compare
soil soil sample 2; outgrowth in LB +1.3 +1.2 compare
soil soil sample 4; outgrowth in LB +1.3 +1.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.5 +4.0 compare
soil soil sample 5; outgrowth in LB +1.5 +1.3 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +1.9 +1.3 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +2.0 +1.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +2.2 +1.5 compare
root root sample 6; outgrowth in LB +2.4 +1.7 compare