Fitness data for PS417_15330 in Pseudomonas simiae WCS417

type VI secretion protein ImpA
SEED: Uncharacterized protein ImpA
KEGG: type VI secretion system protein VasJ

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. simiae OR1 MOI 0.1 -1.4 -3.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -3.0 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x -0.8 -4.1 compare
stress nitrate 200 mM -0.8 -3.8 compare
motility outer cut, LB soft agar motility assay -0.7 -3.2 compare
carbon source L-Leucine (C) -0.6 -2.9 compare
phage P. simiae Grant Run MOI 0.1 -0.6 -2.0 compare
soil soil sample 4; outgrowth in LB -0.6 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.0 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.5 -2.8 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x -0.5 -2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.5 +1.9 compare
stress Nalidixic 0.015 mg/ml +0.5 +2.3 compare
liquid stress Fraxetin 2 mM; liquid stress +0.5 +3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.6 compare
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) +0.6 +2.9 compare
supernatant control Vogels_fungal_media 0.1X +0.6 +2.3 compare
phage P. simiae ORA MOI 0.1 +0.6 +2.3 compare