Fitness data for PS417_15325 in Pseudomonas simiae WCS417

type VI secretion protein
SEED: Uncharacterized protein ImpB
KEGG: type VI secretion system protein ImpB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.0 -1.1 compare
seeds Growth on radish seeds for 24 hours -2.5 -1.5 compare
soil soil sample 7; outgrowth in LB -2.0 -0.9 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.7 -1.3 compare
stress Gentamicin 0.008 mg/ml -1.6 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.6 -1.0 compare
liquid stress Scopoletin 3 mM; liquid stress -1.5 -2.0 compare
carbon source Carbon source L-Citrulline 5 mM -1.5 -1.5 compare
seeds Growth on radish seeds for 72 hours -1.5 -0.9 compare
soil soil sample 5; outgrowth in LB -1.3 -0.7 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -1.3 -1.5 compare
stress L-Lysine 60 mM -1.3 -1.6 compare
solid stress 80% Methanol 3 mM; solid stress -1.3 -1.4 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.3 -0.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -0.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.3 +2.4 compare
phage P. simiae OR1 MOI 0.1 +1.3 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.4 +1.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.5 +1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +2.2 +2.7 compare