Fitness data for PS417_15285 in Pseudomonas simiae WCS417

type VI secretion protein
SEED: Uncharacterized protein ImpI/VasC
KEGG: type VI secretion system protein ImpI

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.3 -1.0 compare
phage P. simiae OR1 MOI 0.1 -5.0 -1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.5 -0.9 compare
seeds Growth on radish seeds for 72 hours -3.2 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -2.4 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.4 -0.8 compare
phage moi 100 Time6-phageFRS -2.3 -1.4 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -2.1 -1.2 compare
carbon source L-Alanine (C) -1.9 -1.8 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.9 -0.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.8 -1.1 compare
phage P. simiae OR Antrim MOI 10 -1.8 -1.0 compare
phage P. simiae ORA MOI 1 -1.7 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -0.9 compare
phage Wcs_0.1 -1.7 -1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.6 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.6 -1.2 compare
carbon source Carbon source D-Mannitol 2.5 mM -1.6 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.5 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +2.3 +2.4 compare